Dynamically generate PKG_CXXFLAGS at compile time using RcppParallel.
detrendr 0.6.15
CRAN release: 2023-03-04
BUG FIXES
Insist on newest, bug-fixed filesstrings, Rcpp and RcppParallel.
detrendr 0.6.14
CRAN release: 2021-05-16
BUG FIXES
Simplify the testing of dir_detrend().
detrendr 0.6.13
CRAN release: 2021-04-21
BUG FIXES
Remove LazyData from DESCRIPTION (was causing CRAN note).
detrendr 0.6.12
CRAN release: 2021-02-08
BUG FIXES
rfromboxes() and rtoboxes() needed to floor the argument n. Lack of doing so was causing them to hang.
detrendr 0.6.11
CRAN release: 2021-01-13
BUG FIXES
Allow the answer for l in a test to be either 17 or 18.
detrendr 0.6.10
BUG FIXES
Insist on bug-fixed filesstrings >= 3.2.
detrendr 0.6.9
CRAN release: 2020-09-03
BUG FIXES
Fix for magrittr 2.0 (which no longer allows you to call return(.) on a magrittr dot).
detrendr 0.6.8
CRAN release: 2020-08-03
BUG FIXES
An image needed for the tests is no longer included in ijtiff so detrendr needs to have it itself.
detrendr 0.6.7
CRAN release: 2020-06-24
BUG FIXES
Skip a few tests on CRAN (necessary because CRAN has so many different machines with various RNG implementations).
detrendr 0.6.6
CRAN release: 2020-05-08
BUG FIXES
Cope with ijtiff not working on 32-bit Windows.
detrendr 0.6.5
CRAN release: 2020-03-16
BUG FIXES
ggplot2 needed to be in Suggests because it is used in a vignette.
detrendr 0.6.4
CRAN release: 2019-07-08
BUG FIXES
Insist on latest, bug-fixed ijtiff v2.0.2.
detrendr 0.6.3
CRAN release: 2019-06-29
BUG FIXES
Ignore a test on CRAN mac (it’s fine on travis mac).
Insist on latest, bug-fixed filesstrings v3.1.5.
detrendr 0.6.2
CRAN release: 2019-06-15
BUG FIXES
Demand latest, least buggy filesstrings, ijtiff and autothresholdr.
Permanently fix the issues that were temporarily fixed in the previous version (R 3.6 has now landed).
detrendr 0.6.1
CRAN release: 2019-04-13
BUG FIXES
Require necessary version of glue.
Temporary fix for upcoming R 3.6 which patches base::sample(). A more permanent fix should be provided when R 3.6 has landed.
detrendr 0.6.0
CRAN release: 2018-11-09
NEW FEATURES
A pkgdown website!
MINOR IMPROVEMENTS
Robin Hood parameter finding is now repeated several (at least 9) times to find a sensible consensus value.
Robin Hood parameter finding includes an adjustment step to avoid over-estimating the number of swaps required.
detrendr 0.5.2
BUG FIXES
Detrending was not working well for images which had dimension 1 in x or y.
detrendr 0.5.1
CRAN release: 2018-04-24
BUG FIXES
Fix tests for CRAN fedora and mac.
detrendr 0.5.0
CRAN release: 2018-04-19
NEW FEATURES
The package no longer depends on RSAGA, making it lighter.
Robin Hood detrending has been added.
detrendr 0.4.0
CRAN release: 2018-02-18
NEW FEATURES
Add the option to detrend for the purpose of FCS or FFS.
detrendr 0.3.0
NEW FEATURES
Batch processing: detrend an entire folder with the likes of dir_detrend_exp().
BUG FIXES
Asymmetric images caused R to crash.
NAs in simulated brightnesses were needlessly causing the automatic parameter-finding routines to fail.
detrendr 0.2.0
CRAN release: 2018-01-04
NEW FEATURES
The process of extending time series prior to smoothing is not done any more. This was introducing errors for images with low counts. Smoothing works fine without it. Dropping this extension gives a massive improvement in detrending speed :-)
TIFF I/O and image display are now taken care of by the ijtiff package.
