All functions

apply_on_pillars()

Apply a function to each pillar of a 3-dimensional array.

best_degree()

Find the best polynomial degree for polynomial detrending.

best_l()

Find the best length parameter for boxcar detrending.

best_swaps()

Find the best swaps parameter for Robin Hood detrending.

best_tau()

Find the best tau parameter for exponential smoothing detrending.

brightness_pillars()

Get the brightness of pillars of a 3d array.

dir_detrend_robinhood() dir_detrend_rh() dir_detrend_boxcar() dir_detrend_exp() dir_detrend_polynom()

Detrend all TIFF images in an entire folder.

detrended_img()

Detrended image class.

img_detrend_robinhood() img_detrend_rh() img_detrend_boxcar() img_detrend_exp() img_detrend_polynom()

Detrend images.

detrendr

detrendr: Image detrending in R.

mean_frames() sum_frames()

Get the sums/means of frames in a 3-dimensional array.

sum_pillars() mean_pillars() median_pillars() var_pillars()

Get the sums/means/medians/variances of pillars of an ijtiff_img-style array.

rfromboxes()

Randomly draw balls from boxes.

rtoboxes()

Randomly place balls in boxes.